Publications

Manuel Cáceres, Brendan Mumey, Edin Husić, Romeo Rizzi, Massimo Cairo, Kristoffer Sahlin, Alexandru I. Tomescu (2022). Safety in multi-assembly via paths appearing in all path covers of a DAG. In IEEE/ACM Transactions on Computational Biology and Bioinformatics.

Manuel Cáceres, Massimo Cairo, Brendan Mumey, Romeo Rizzi, Alexandru I. Tomescu (2021). A linear-time parameterized algorithm for computing the width of a DAG. In WG 2021.

Manuel Cáceres, Gonzalo Navarro (2021). Faster repetition-aware compressed suffix trees based on block trees. In Information and Computation.

Djamal Belazzougui, Manuel Cáceres, Travis Gagie, Pawel Gawrychowski, Juha Kärkkäinen, Gonzalo Navarro, Alberto Ordóñez, Simon J. Puglisi, Yasuo Tabei (2020). Block Trees. In Journal of Computer and System Sciences.

Manuel Cáceres, Simon J. Puglisi, Bella Zhukova (2020). Fast Indexes for Gapped Pattern Matching. In SOFSEM 2020.

Manuel Cáceres, Gonzalo Navarro (2019). Faster Repetition-Aware Compressed Suffix Trees Based on Block Trees. In SPIRE 2019.